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```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name> 0-9 years old@13:49:08</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 0-9 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\0-9 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 0-9 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients who are 0-9 years old with any specificity and accuracy, and the query should be applied to the Demographics panel with a specificity scale of 0 and a panel timing of ANY. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory sys@16:51:38</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all diagnoses related to the Circulatory system (ICD codes 390-459) with a specificity scale of 0, accuracy scale of 100, and any timing using the i2b2 query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Gende-Atlas-Circu@21:32:46</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Atlas Registered</item_name>
<item_key>\\BIRN\BIRN\oasis\Images\Atlas Registered\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Images \ Atlas Registered Images</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients who have demographic information recorded for gender, have at least one image in the oasis Atlas Registered Images category, and have any diagnosis related to the circulatory system (ICD-9 codes 390-459). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essen-Diabe-Chole@08:21:42</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Cholesterol (Group:CHOL)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB17) Lipid Tests\CHOL\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Lipid Tests \ Cholesterol (Group:CHOL)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>LT</value_operator>
<value_constraint>120</value_constraint>
<value_unit_of_measure>mg/dl</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of essential hypertension, diabetes mellitus, and cholesterol levels less than 2000 mg/dL. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory sys@16:51:08</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all diagnoses related to the circulatory system (ICD-9 codes 390-459) with a specificity scale of 0, accuracy scale of 100, and any timing. The panel will have a total of one item occurrence and the panel timing will also be set to any. The item will be classified as an ENC (Encounter) and will not be considered a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>mild dementia@09:43:31</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>mild dementia</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\mild dementia\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ Clinical Dementia Rating (CDR) \ mild dementia</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Beyond college</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Education\Beyond college\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Demographics \ Education \ Beyond college</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of mild dementia who have an education level beyond college. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cough-Acute u@15:02:45</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Cough</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(R00-R99) Symp~mt2x\(R00-R09) Symp~evaq\(R05) Cough\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified (r00-r99) \ Symptoms and signs involving the circulatory and respiratory systems (r00-r09)
\ Cough</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Acute upper respiratory infections of multiple and unspecified sites</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J00-J06) Acut~bb2r\(J06) Acute up~x6qf\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Acute upper respiratory infections (j00-j06) \ Acute upper respiratory infections of multiple and unspecified sites</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with acute upper respiratory infections of multiple and unspecified sites (J06) and have experienced symptoms of cough (R05) during the same visit or within the same instance, with a specificity scale of 0 and a total item occurrence of 1 for each panel. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>O2 Saturation (Group:O2 Sat)@15:44:43</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>O2 Saturation (Group:O2 Sat)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB24) Blood Gases\O2 Sat\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Blood Gases \ O2 Saturation (Group:O2 Sat)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>BETWEEN</value_operator>
<value_constraint>10 and 200</value_constraint>
<value_unit_of_measure>%</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of O2 Saturation (Group:O2 Sat) lab test results with a value between 10 and 20 percent, regardless of the time it was taken, and display it on panel 1 with a high level of accuracy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essenti-Diabete@08:22:10</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of essential hypertension and diabetes mellitus in their medical records, with no specific timing or accuracy requirements for the diagnoses. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Gender@15:05:48</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with any gender recorded in the demographics section of the i2b2 database using the specific panel named "Gender" with a total of one item occurrence, a high level of 2, and an accuracy scale of 100, without inverting the results, and with a panel timing set to "ANY." |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>55-64 years old-Circulatory system@14:56:27</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 55-64 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients aged 5-64 years old with diagnoses related to the circulatory system (ICD codes 390-459). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Metabolic and i@21:31:46</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Metabolic and immunity disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find diagnoses related to metabolic and immunity disorders (ICD-9 codes 270-279) with any timing and 100% accuracy, including all occurrences, and display it in a panel with the specified icon and tooltip. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Metab-Respi-Lipid@21:33:52</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Metabolic and immunity disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Respiratory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Respiratory system (460-519)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Respiratory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Lipid Tests</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB17) Lipid Tests\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Lipid Tests</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find diagnoses related to metabolic and immunity disorders, respiratory system issues, and lipid tests within the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diabetes mellit@14:32:13</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with a diagnosis of Diabetes Mellitus, regardless of the timing or specificity scale, and with an accuracy scale of 100, in a single panel of the query, using the Endocrine disorders classification (240-259), Other endocrine gland diseases (250-259), and the Diabetes mellitus subcategory (250). The query will be named "Diabetes mellitus" and will be represented by the icon "FA". This query is not a synonym and will be classified as an ENC (Encounter) type. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diagnos-Chemist@17:51:26</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Chemistry</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients who have been diagnosed with any condition and have had a chemistry lab test performed on them, with the results being recorded in the system. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cough@15:07:52</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Cough</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(R00-R99) Symp~mt2x\(R00-R09) Symp~evaq\(R05) Cough\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified (r00-r99) \ Symptoms and signs involving the circulatory and respiratory systems (r00-r09)
\ Cough</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Acute upper respiratory infections of multiple and unspecified sites</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J00-J06) Acut~bb2r\(J06) Acute up~x6qf\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Acute upper respiratory infections (j00-j06) \ Acute upper respiratory infections of multiple and unspecified sites</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with cough (ICD10/ICD9 code: R05) and acute upper respiratory infections of multiple and unspecified sites (ICD10/ICD9 code: J06) within the same encounter, with a specificity scale of 0 and a panel accuracy scale of 100. The query should search for these diagnoses at any time (ANY timing) and the panel should be analyzed using the same instance number (SAMEINSTANCENUM). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Coug-Acute upper respiratory infections of multiple and unspec-Acute upper respiratory infections of multiple and unspec@15:10:21</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Cough</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(R00-R99) Symp~mt2x\(R00-R09) Symp~evaq\(R05) Cough\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified (r00-r99) \ Symptoms and signs involving the circulatory and respiratory systems (r00-r09)
\ Cough</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Acute upper respiratory infections of multiple and unspecified sites</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J00-J06) Acut~bb2r\(J06) Acute up~x6qf\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Acute upper respiratory infections (j00-j06) \ Acute upper respiratory infections of multiple and unspecified sites</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Acute upper respiratory infections of multiple and unspecified sites</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J00-J06) Acut~bb2r\(J06) Acute up~x6qf\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Acute upper respiratory infections (j00-j06) \ Acute upper respiratory infections of multiple and unspecified sites</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with acute upper respiratory infections of multiple and unspecified sites and have experienced symptoms of cough during the same visit. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>(t) Epileps-ImagesDemograAtlas R@15:17:14</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Epilepsy</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Neurologic Disorders (320-389)\(345) Epilepsy\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Neurologic Disorders \ Epilepsy</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Images</item_name>
<item_key>\\BIRN\BIRN\oasis\Images\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Images</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<subquery_constraint>
<first_query>
<query_id>Observation A</query_id>
<join_column>STARTDATE</join_column>
<aggregate_operator>FIRST</aggregate_operator>
</first_query>
<operator>LESS</operator>
<second_query>
<query_id>Observation B</query_id>
<join_column>STARTDATE</join_column>
<aggregate_operator>FIRST</aggregate_operator>
</second_query>
</subquery_constraint>
<subquery>
<query_id>Observation A</query_id>
<query_type>EVENT</query_type>
<query_name>Observation A</query_name>
<query_timing>SAMEINSTANCENUM</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>0</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Demographics</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Demographics</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</subquery>
<subquery>
<query_id>Observation B</query_id>
<query_type>EVENT</query_type>
<query_name>Observation B</query_name>
<query_timing>SAMEINSTANCENUM</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>0</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Atlas Registered</item_name>
<item_key>\\BIRN\BIRN\oasis\Images\Atlas Registered\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Images \ Atlas Registered Images</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</subquery>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of Epilepsy who have had at least one encounter with an oasis "Demographics" panel and at least one encounter with an oasis "Atlas Registered" panel, where the "Atlas Registered" panel occurred before the "Demographics" panel. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cough-Acute u@15:02:05</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Cough</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(R00-R99) Symp~mt2x\(R00-R09) Symp~evaq\(R05) Cough\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified (r00-r99) \ Symptoms and signs involving the circulatory and respiratory systems (r00-r09)
\ Cough</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Acute upper respiratory infections of multiple and unspecified sites</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J00-J06) Acut~bb2r\(J06) Acute up~x6qf\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Acute upper respiratory infections (j00-j06) \ Acute upper respiratory infections of multiple and unspecified sites</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with cough and acute upper respiratory infections of multiple and unspecified sites within any time frame, with a specificity scale of 0 and a panel accuracy scale of 100. The query will be looking for these two diagnoses with a high level of detail (hlevel 3) and will not be inverted. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cough-Acute u@15:02:31</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Cough</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(R00-R99) Symp~mt2x\(R00-R09) Symp~evaq\(R05) Cough\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified (r00-r99) \ Symptoms and signs involving the circulatory and respiratory systems (r00-r09)
\ Cough</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Acute upper respiratory infections of multiple and unspecified sites</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J00-J06) Acut~bb2r\(J06) Acute up~x6qf\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Acute upper respiratory infections (j00-j06) \ Acute upper respiratory infections of multiple and unspecified sites</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of acute upper respiratory infections of multiple and unspecified sites (J06) and a symptom of cough (R05) within the same encounter. The specificity scale is set to 0, indicating that the occurrence of either condition is sufficient for the patient to be included in the query results. The accuracy scale is set to 100, meaning that the diagnosis and symptom must be present in the same encounter for the patient to be included in the results. The panel timing is set to SAMEINSTANCENUM, indicating that the diagnosis and symptom must occur in the same encounter. The total item occurrences are set to 1, meaning that only one instance of the diagnosis and symptom combination is required for the patient to be included in the results. The class is set to ENC, which stands for "Encounter", indicating that the query is focused on encounters where the diagnosis and symptom occurred together. The query is named "Cough-Acute u@15:02:31". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cough-Acute u@15:02:39</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Cough</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(R00-R99) Symp~mt2x\(R00-R09) Symp~evaq\(R05) Cough\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified (r00-r99) \ Symptoms and signs involving the circulatory and respiratory systems (r00-r09)
\ Cough</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Acute upper respiratory infections of multiple and unspecified sites</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J00-J06) Acut~bb2r\(J06) Acute up~x6qf\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Acute upper respiratory infections (j00-j06) \ Acute upper respiratory infections of multiple and unspecified sites</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with acute upper respiratory infections (J00-J06) and have reported symptoms of cough (R05) during the same visit. The specificity scale is set to 0, indicating that the search should be broad, and the accuracy scale for both panels is set to 100, meaning that the results will be highly accurate. This query is designed to identify patients with both diagnoses and symptoms related to cough and acute upper respiratory infections. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cough@15:07:59</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Cough</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(R00-R99) Symp~mt2x\(R00-R09) Symp~evaq\(R05) Cough\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified (r00-r99) \ Symptoms and signs involving the circulatory and respiratory systems (r00-r09)
\ Cough</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Acute upper respiratory infections of multiple and unspecified sites</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J00-J06) Acut~bb2r\(J06) Acute up~x6qf\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Acute upper respiratory infections (j00-j06) \ Acute upper respiratory infections of multiple and unspecified sites</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with cough or acute upper respiratory infections of multiple and unspecified sites, with a specificity scale of 0 and panel timing set to same visit, within the specified ICD-10 and ICD-9 codes, with a total of 2 items in the panel and a panel accuracy scale of 100. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>(t) Epileps-ImagesDemograAtlas R@15:16:45</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Epilepsy</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Neurologic Disorders (320-389)\(345) Epilepsy\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Neurologic Disorders \ Epilepsy</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Images</item_name>
<item_key>\\BIRN\BIRN\oasis\Images\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Images</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<subquery_constraint>
<first_query>
<query_id>Observation A</query_id>
<join_column>STARTDATE</join_column>
<aggregate_operator>FIRST</aggregate_operator>
</first_query>
<operator>LESS</operator>
<second_query>
<query_id>Observation B</query_id>
<join_column>STARTDATE</join_column>
<aggregate_operator>FIRST</aggregate_operator>
</second_query>
</subquery_constraint>
<subquery>
<query_id>Observation A</query_id>
<query_type>EVENT</query_type>
<query_name>Observation A</query_name>
<query_timing>SAMEINSTANCENUM</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>0</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Demographics</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Demographics</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</subquery>
<subquery>
<query_id>Observation B</query_id>
<query_type>EVENT</query_type>
<query_name>Observation B</query_name>
<query_timing>SAMEINSTANCENUM</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>0</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Atlas Registered</item_name>
<item_key>\\BIRN\BIRN\oasis\Images\Atlas Registered\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Images \ Atlas Registered Images</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</subquery>
</ns4:query_definition>
``` |
I want to find all patients who have been diagnosed with Epilepsy and have had an Atlas Registered image taken at the same time or any time before their demographic information was recorded. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>(t) CoughAcute upper res@15:19:39</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<subquery_constraint>
<first_query>
<query_id>Observation A</query_id>
<join_column>STARTDATE</join_column>
<aggregate_operator>FIRST</aggregate_operator>
</first_query>
<operator>LESS</operator>
<second_query>
<query_id>Observation B</query_id>
<join_column>STARTDATE</join_column>
<aggregate_operator>FIRST</aggregate_operator>
</second_query>
</subquery_constraint>
<subquery>
<query_id>Observation A</query_id>
<query_type>EVENT</query_type>
<query_name>Observation A</query_name>
<query_timing>SAMEINSTANCENUM</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>0</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Cough</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(R00-R99) Symp~mt2x\(R00-R09) Symp~evaq\(R05) Cough\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified (r00-r99) \ Symptoms and signs involving the circulatory and respiratory systems (r00-r09)
\ Cough</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</subquery>
<subquery>
<query_id>Observation B</query_id>
<query_type>EVENT</query_type>
<query_name>Observation B</query_name>
<query_timing>SAMEINSTANCENUM</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>0</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Acute upper respiratory infections of multiple or unspecified sites</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Respiratory system (460-519)\Acute respiratory infections (460-466)\(465) Acute upper respiratory inf~\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Respiratory system \ Acute respiratory infections \ Acute upper respiratory infections of multiple or unspecified sites</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</subquery>
</ns4:query_definition>
``` |
I want to find patients who have had an occurrence of "Cough" within the same encounter as "Acute upper respiratory infections of multiple or unspecified sites" with a specificity scale of 0 and the time constraint being any time. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>(t) Cough-Acute upper respiratory infections of multiple or unspecified sites@15:20:25</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<subquery_constraint>
<first_query>
<query_id>Event 1</query_id>
<join_column>STARTDATE</join_column>
<aggregate_operator>FIRST</aggregate_operator>
</first_query>
<operator>LESS</operator>
<second_query>
<query_id>Event 2</query_id>
<join_column>STARTDATE</join_column>
<aggregate_operator>FIRST</aggregate_operator>
</second_query>
</subquery_constraint>
<subquery>
<query_id>Event 1</query_id>
<query_type>EVENT</query_type>
<query_name>Event 1</query_name>
<query_timing>SAMEINSTANCENUM</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Cough</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(R00-R99) Symp~mt2x\(R00-R09) Symp~evaq\(R05) Cough\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified (r00-r99) \ Symptoms and signs involving the circulatory and respiratory systems (r00-r09)
\ Cough</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</subquery>
<subquery>
<query_id>Event 2</query_id>
<query_type>EVENT</query_type>
<query_name>Event 2</query_name>
<query_timing>SAMEINSTANCENUM</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Acute upper respiratory infections of multiple or unspecified sites</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Respiratory system (460-519)\Acute respiratory infections (460-466)\(465) Acute upper respiratory inf~\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Respiratory system \ Acute respiratory infections \ Acute upper respiratory infections of multiple or unspecified sites</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</subquery>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with both "Cough" and "Acute upper respiratory infections of multiple or unspecified sites" in the same encounter. The cough diagnosis should be more specific (ICD10_ICD9 code range R00-R9) and the acute upper respiratory infections diagnosis should be from the i2b2 Diagnoses code range 465. The query will be more accurate when the two events occur in the same instance (SAMEINSTANCENUM). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@15:24:25@15:24:43</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery) Circulatory system@15:24:25</item_name>
<item_key>masterid:27680</item_key>
<tooltip>Circulatory system@15:24:25 [5-4-2023] [demo]</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the term "Circulatory system" that were recorded between 2:25 PM and 2:43 PM on any day, with a specificity scale of 0 and a panel accuracy scale of 100, with only one item occurrence, and where the item is not a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system-Arterial vascular disease@15:26:22</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Arterial vascular disease</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Arterial vascular disease (440-447)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Arterial vascular disease</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of arterial vascular disease (ICD codes 40-47) within the circulatory system (ICD codes 390-459) at any time during their medical history, with a high specificity and accuracy, and considering the admit diagnosis modifier. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>(t) Cough-Acute upper respiratory infections of multiple or unspecified sites@15:20:40</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>2</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Cough</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(R00-R99) Symp~mt2x\(R00-R09) Symp~evaq\(R05) Cough\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified (r00-r99) \ Symptoms and signs involving the circulatory and respiratory systems (r00-r09)
\ Cough</tooltip>
<class>ENC</class>
<constrain_by_date>
<date_from>2000-05-03T00:00:00</date_from>
<date_to>2007-05-01T00:00:00</date_to>
</constrain_by_date>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with acute upper respiratory infections of multiple or unspecified sites and have experienced cough symptoms during any time period, with a specificity scale of 0 and a total of 2 occurrences of these symptoms within the same visit, and the data should be constrained between May 3, 20000 and May 1, 2007. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>(t) Cough-Acute upper respiratory infections of multiple or unspecified sites@15:20:40</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>2</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Cough</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(R00-R99) Symp~mt2x\(R00-R09) Symp~evaq\(R05) Cough\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified (r00-r99) \ Symptoms and signs involving the circulatory and respiratory systems (r00-r09)
\ Cough</tooltip>
<class>ENC</class>
<constrain_by_date>
<date_to>2007-05-01T00:00:00</date_to>
</constrain_by_date>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with acute upper respiratory infections of multiple or unspecified sites who have experienced cough symptoms at any time, with a specificity scale of 0 and a panel accuracy scale of 100, with the diagnosis code constrained by date. The query will include two items: one for cough symptoms and another for acute upper respiratory infections, both with a high level of specificity (hlevel = 3) and no synonyms. The query will have a total of two item occurrences, with the first item focusing on cough symptoms and the second item focusing on acute upper respiratory infections of multiple or unspecified sites. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@15:23:31</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>1</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with diagnoses related to the circulatory system (ICD codes 390-459) as either the admit diagnosis or principal diagnosis, with no specific time frame and high accuracy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>O2 Saturation (Group:O2 Sat)@15:46:45</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>O2 Saturation (Group:O2 Sat)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB24) Blood Gases\O2 Sat\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Blood Gases \ O2 Saturation (Group:O2 Sat)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>GT</value_operator>
<value_constraint>10 and 200</value_constraint>
<value_unit_of_measure>%</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of O2 Saturation (Group: O2 Sat) values from the Blood Gases section of the Chemistry panel in the Labtests section, with a specificity scale of 0 and an accuracy scale of 100, where the values are greater than or equal to 10 and less than or equal to 20, within any time frame. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@15:24:25</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>1</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find diagnoses related to the circulatory system (ICD codes 390-459) with a specificity scale of 0, applied to any timing, and constrained by either the Admit Diagnosis or Principal Diagnosis modifiers. The panel will have a total of 1 item occurrence and a panel accuracy scale of 100. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin-Cefazolin@15:30:21</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('AC')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication "Cefazolin" in the i2b2 database, where the dose is less than or equal to 1000 mg, administered every day (AC), and taken once daily (QD). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin@15:30:37</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('AC')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication Cefazolin with a dose of less than or equal to 1000 mg, administered in any frequency, at any time, within the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin@15:30:37</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find instances where a patient was given Cefazolin medication with a dose less than or equal to 1000mg and administered at a frequency of "QD" (once daily) during the same visit. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@15:25:59</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>1</hlevel>
<item_name>Arterial vascular disease</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Arterial vascular disease (440-447)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Arterial vascular disease</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with any diagnosis related to the circulatory system, including arterial vascular disease, using the Admit Diagnosis modifier with a specificity scale of 0 and a panel accuracy scale of 100. The query should search for these diagnoses at any time during the patient's medical history. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@15:26:42</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<constrain_by_date>
<date_from>2002-05-02T00:00:00</date_from>
</constrain_by_date>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all diagnoses related to the circulatory system (ICD-9 codes 390-459) in the i2b2 database, with a specificity scale of 0, any timing, and constrained by the Admit Diagnosis modifier. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin@15:28:53</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LT</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('BID')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication "Cefazolin" where the dose is less than 1000 mg and the frequency is twice daily (BID) within the "anti-infectives" category, specifically within the "cephalosporins" and "first generation cephalosporins" subcategories. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin@15:28:53</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LT</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('AC','QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication "Cefazolin" where the dose is less than 1000 mg and the frequency is either "AC" (every other day) or "QD" (every day). This query will search for records within the i2b2 database that meet these specific criteria, focusing on the medication type, dose, and frequency. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Aminoquinolones@15:27:42</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Aminoquinolones</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME18) antimalarial agents\(LME19) aminoquinolones\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ antimalarial agents \ aminoquinolones</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Route</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Route\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('injection')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of medications related to the class of aminoquinolones, specifically antimalarial agents within the anti-infectives category, using the "Aminoquinolones" item from the i2b2 query builder xml. The query will search for medications administered through injection and has a specificity scale of 0, meaning it will return all instances of aminoquinolones regardless of time or accuracy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin@15:28:30</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LT</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of Cefazolin medication that have been administered in doses less than 1000 mg within the specified time frame (ANY). This query is specifically targeting first-generation cephalosporins, which is a class of antibiotics used for treating bacterial infections. The query will look for instances of Cefazolin within the anti-infectives category of medications and apply a constraint on the dose to only include values less than 1000 mg. The specificity scale is set to 0, indicating that the query will return all possible matches, and the panel accuracy scale is set to 100, meaning that the results will be 1000% accurate. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin@15:28:53</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('AC','QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication Cefazolin with a dose of less than or equal to 1000 mg and a frequency of either 'AC' (as needed) or 'QD' (once daily) in the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name> Visit -English@11:13:37</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> Visit at ages 18-34 years old</item_name>
<item_key>\\i2b2_VISIT\i2b2\Visit Details\Age at visit\18-34 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Visit Details \ Age at visit \ 18-34 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>English</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Language\English\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Language \ English</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find male patients between the ages of 18 and 34 years old who have had a visit and speak English as their primary language. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Admit Diagnosis@09:35:16</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Certain infectious and parasitic diseases (a00-b99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(A00-B99) Cert~ugmm\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Certain infectious and parasitic diseases (a00-b99)</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\ICD10_ICD9\Admit Diagnosis\</modifier_key>
<applied_path>\Diagnoses\(A00-B99) Cert~ugmm\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with any diagnosis related to infectious and parasitic diseases (ICD10 codes A0-B9) listed as their admit diagnosis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin@15:28:53</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('AC','BID','QD','QHS','TID')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication Cefazolin that have a dose of less than or equal to 1000 mg and are taken at a frequency of either AC (every day), BID (twice daily), QD (once daily), QHS (every night), or TID (three times daily). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin@15:30:37</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication "Cefazolin" where the dose is less than or equal to 1000 mg and the frequency is "QD" (once daily) in the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin-Cefazolin@15:31:58</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Patient Instructions</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Instructions\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication "Cefazolin" that have a dose less than or equal to 1000 mg, taken once daily (QD), and have the specific instructions for patient use in the i2b2 Medications database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin@15:30:37</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances where the medication "Cefazolin" was prescribed at a dose less than or equal to 1000 mg, and administered on a daily basis (QD) within the same instance number. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin-Cefazolin@15:32:15</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Route</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Route\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('PO')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication "Cefazolin" where the dose is less than or equal to 1000 mg, it is prescribed once daily (QD), and administered orally (PO). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin-Cefazolin@15:32:15</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Route</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Route\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('inhalation','injection','IV','PO','PR','topical','transdermal')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication Cefazolin, with a dose less than or equal to 1000 mg, administered through any of the routes including inhalation, injection, IV, PO, PR, topical, or transdermal, and with a frequency of QD (once daily). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>O2 Saturation (Group:O2 Sat)@15:46:45</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>O2 Saturation (Group:O2 Sat)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB24) Blood Gases\O2 Sat\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Blood Gases \ O2 Saturation (Group:O2 Sat)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>GT</value_operator>
<value_constraint>20</value_constraint>
<value_unit_of_measure>%</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances where the O2 Saturation (Group:O2 Sat) value is greater than 20% in any time frame, with an accuracy of 100%, and displayed on the first panel of the query with the specificity scale set to 0 and the invert option set to 0. The query is named "O2 Saturation (Group:O2 Sat)@15:46:45" and is related to the Blood Gases category under the Chemistry section of Lab tests. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin-Cefazolin@15:33:14</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Route</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Route\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('injection')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find instances where a patient has been administered Cefazolin, a first-generation cephalosporin antibiotic, with a dose of less than or equal to 1000 mg, taken once daily (QD), and through an injection route. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin-Cefazolin-Cefazolin@15:33:45</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Route</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Route\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('injection')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>4</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Rx Sig</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\RxSig\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_constraint>A</value_constraint>
<value_type>FLAG</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of Cefazolin, a first-generation cephalosporin antibiotic, with a dose of 1000 mg or less, taken once daily (QD), administered by injection, and prescribed with a refill (Rx Sig) option. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin@15:35:42</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Rx Sig</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\RxSig\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication 'cefazolin' within the i2b2 database, regardless of timing, with a specificity scale of 0 and an accuracy scale of 100, and with the medication being part of the first-generation cephalosporins group of anti-infectives. The query should be constrained by the 'Rx Sig' modifier and its applied path should be 'i2b2\Medications\%'. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin@15:43:41</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Rx Sig</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\RxSig\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication "cefazolin" within the "anti-infectives" category, specifically within the "cephalosporins" group, and more specifically within the "first generation cephalosporins" subgroup, with a high level of specificity and accuracy, and constrained by the "Rx Sig" modifier in the "Medication" category, within the i2b2 data repository. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin-Cefazolin-Cefazolin@15:33:45</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Route</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Route\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('injection')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>4</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Rx Sig</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\RxSig\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>EQ</value_operator>
<value_constraint>@</value_constraint>
<value_type>FLAG</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication "Cefazolin" in the i2b2 database, where it is classified under "anti-infectives" and "cephalosporins", specifically within the "first generation cephalosporins" category. The dose of Cefazolin should be less than or equal to 1000 mg, it should be administered at a frequency of "QD" (once daily), via injection, and has a prescription signature (Rx Sig) set to "@". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin-Cefazolin-Cefazolin@15:33:45</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Dose</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Dose\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Frequency</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Frequency\</modifier_key>
<applied_path>\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('QD')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>SAMEINSTANCENUM</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Route</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Route\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>IN</value_operator>
<value_constraint>('injection')</value_constraint>
<value_type>TEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>4</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Cefazolin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Rx Sig</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\RxSig\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication "Cefazolin" that have a dose less than or equal to 1000 mg, administered through injection, taken once daily (QD), and have a route of administration as "injection". Additionally, I want to include the prescription details (Rx Sig) in the search result. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>O2 Saturation (Group:O2 Sat)@15:47:19</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>O2 Saturation (Group:O2 Sat)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB24) Blood Gases\O2 Sat\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Blood Gases \ O2 Saturation (Group:O2 Sat)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>LT</value_operator>
<value_constraint>20</value_constraint>
<value_unit_of_measure>%</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of O2 Saturation (Group:O2 Sat) in the Blood Gases section of the Chemistry category in the Labtests section of the i2b2 database, with a value less than 20% and a specificity scale of 0, panel timing of ANY, and accuracy scale of 100, within a single panel. This query is not a synonym and is constructed using the ANY timing and LT value operator. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>CK-MB QUANT (Group:CPK-MB)@15:48:54</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>CK-MB QUANT (Group:CPK-MB)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB20) Cardiac Tests\CPK-MB\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Cardiac Tests \ CK-MB QUANT (Group:CPK-MB)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>EQ</value_operator>
<value_constraint>@</value_constraint>
<value_type>FLAG</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of CK-MB QUANT (Group:CPK-MB) lab test results with a specificity scale of 0, an accuracy scale of 100, and any timing within the i2b2 data repository. The query should be named "CK-MB QUANT (Group:CPK-MB)@15:48:54" and include a single panel with the specified constraints. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Ancef 10gm powder for injection SmithKline Beecham@15:36:57</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Ancef 10gm powder for injection SmithKline Beecham</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME36) cephalosporins\(LME37) first generation cephalosporins\cefazolin\00007313505\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ cephalosporins \ first generation cephalosporins \ cefazolin \ ancef 10gm powder for injection smithkline beecham</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Rx Sig</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\RxSig\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find any instances of "Ancef 10gm powder for injection SmithKline Beecham" medication within the i2b2 database, specifically within the "anti-infectives" category under "cephalosporins" and "first generation cephalosporins" subcategories, and under the "medications" category. The query is not restricted by timing, has a specificity scale of 0, and has a total of 1 item occurrence. The item is not a synonym and is constrained by the "Rx Sig" modifier with an applied path of "\i2b2\Medications\%". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>O2 Saturation (Group:O2 Sat)@15:44:43</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>O2 Saturation (Group:O2 Sat)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB24) Blood Gases\O2 Sat\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Blood Gases \ O2 Saturation (Group:O2 Sat)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>LE</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>%</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances where the O2 Saturation (Group: O2 Sat) value is less than or equal to 1000% in the i2b2 Labtests Chemistry Blood Gases section, with no specific timing constraints and a high level of accuracy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>O2 Saturation (Group:O2 Sat)@15:44:43</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>O2 Saturation (Group:O2 Sat)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB24) Blood Gases\O2 Sat\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Blood Gases \ O2 Saturation (Group:O2 Sat)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>GT</value_operator>
<value_constraint>10 and 200</value_constraint>
<value_unit_of_measure>%</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of O2 Saturation (Group:O2 Sat) blood gas results in the i2b2 database, with a value between 10 and 20%, at any time, with a specificity scale of 0, and with a total item occurrence of 1. The query should be applied to panel 1 with an accuracy scale of 100 and the item should be classified as an ENC (Encounter). The icon used for this item should be FA, and the tooltip should display "Labtests \ Chemistry \ Blood Gases \ O2 Saturation (Group:O2 Sat)". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>CK-MB QUANT (Group:CPK-MB)@15:52:57</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>CK-MB QUANT (Group:CPK-MB)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB20) Cardiac Tests\CPK-MB\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Cardiac Tests \ CK-MB QUANT (Group:CPK-MB)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>EQ</value_operator>
<value_constraint>H</value_constraint>
<value_type>FLAG</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the "CK-MB QUANT (Group:CPK-MB)" lab test within the "Chemistry" and "Cardiac Tests" category, with a specificity scale of 0 and accuracy scale of 100, regardless of timing, and the value should be constrained to "H" (High) flag. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>De-Identified MRI Reports@15:55:17</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>De-Identified MRI Reports</item_name>
<item_key>\\i2b2_REP\i2b2\Reports\De-Identified MRI Reports\</item_key>
<item_icon>LA</item_icon>
<tooltip>\ i2b2 \ Reports \ De-Identified MRI Reports \</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>CONTAINS</value_operator>
<value_constraint>Negative except she has a mother who died of an MI and had diabetes</value_constraint>
<value_type>LARGETEXT</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all de-identified MRI reports that contain the text "Negative except she has a mother who died of an MI and had diabetes" in the large text field, with a specificity scale of 0 and accuracy scale of 100, and with any timing constraint. The query is named "De-Identified MRI Reports@15:55:17" and is part of panel 1 with any timing. The class is ENC and the item is not a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>De-Identified MRI Reports@15:55:17</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>De-Identified MRI Reports</item_name>
<item_key>\\i2b2_REP\i2b2\Reports\De-Identified MRI Reports\</item_key>
<item_icon>LA</item_icon>
<tooltip>\ i2b2 \ Reports \ De-Identified MRI Reports \</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>CONTAINS[database]</value_operator>
<value_constraint>Negative except she has a mother who died of an MI and had diabetes</value_constraint>
<value_type>LARGETEXT</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find de-identified MRI reports with any timing, containing the phrase "Negative except she has a mother who died of an MI and had diabetes" in the large text field, and with a specificity scale of 0 and accuracy scale of 100. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>De-Identified MRI Reports@15:55:17</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>De-Identified MRI Reports</item_name>
<item_key>\\i2b2_REP\i2b2\Reports\De-Identified MRI Reports\</item_key>
<item_icon>LA</item_icon>
<tooltip>\ i2b2 \ Reports \ De-Identified MRI Reports \</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all de-identified MRI reports with any timing, high specificity, and a panel accuracy scale of 100, using the i2b2 query builder. The query will search for a single item, "De-Identified MRI Reports", located in the i2b2 Reports folder, and will display the results in the Encounter class. The query has no synonyms and the panel timing is set to ANY. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>De-Identified MRI Reports@15:55:17</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>De-Identified MRI Reports</item_name>
<item_key>\\i2b2_REP\i2b2\Reports\De-Identified MRI Reports\</item_key>
<item_icon>LA</item_icon>
<tooltip>\ i2b2 \ Reports \ De-Identified MRI Reports \</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>CONTAINS</value_operator>
<value_constraint>blood</value_constraint>
<value_type>LARGETEXT</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all de-identified MRI reports containing the word "blood" within the specified time frame. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>(t) Cough-Acute@15:58:39</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery)(t) Cough-Acute upper respiratory infections of multiple or unspecified sites@15:20:40</item_name>
<item_key>masterid:27678</item_key>
<tooltip>(t) Cough-Acute upper respiratory infections of multiple or unspecified sites@15:20:40</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with acute cough and upper respiratory infections of multiple or unspecified sites at any time during their medical history, with a specificity scale of 0 and a panel accuracy scale of 100, and the query should be applied to the same visit. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cough-Acute upper respiratory infections of multiple or unspecified sites@15:20:40@15:58:3@15:59:14</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery) Cough-Acute upper respiratory infections of multiple or unspecified sites@15:20:40@15:58:3</item_name>
<item_key>masterid:27730</item_key>
<tooltip>Cough-Acute upper respiratory infections of multiple or unspecified sites@15:20:40@15:58:3 [5-4-2023] [demo]</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with cough and acute upper respiratory infections of multiple or unspecified sites, with a specificity scale of 0 and panel accuracy scale of 10, within any time range. The query includes a panel with one item, which is a previously defined query with the key "masterid:2730" and the tooltip "Cough-Acute upper respiratory infections of multiple or unspecified sites@15:20:40@15:58:3 [5-4-2023] [demo]". The panel timing is set to ANY, meaning it can be any time before, during, or after the specified time range. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>@15:59:22</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery) </item_name>
<item_key>masterid:27730</item_key>
<tooltip>(PrevQuery) Cough-Acute upper respiratory infections of multiple or unspecified sites@15:20:40@15:58:3</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of acute upper respiratory infections of multiple or unspecified sites, with a symptom of cough, within the specified time range. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Acute u-Chronic@17:22:59</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Acute upper respiratory infections (j00-j06)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J00-J06) Acut~bb2r\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Acute upper respiratory infections (j00-j06)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>1</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Chronic lower respiratory diseases (j40-j47)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J40-J47) Chro~fbox\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Chronic lower respiratory diseases (j40-j47)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Influenza and pneumonia (j09-j18)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J09-J18) Infl~7z2l\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Influenza and pneumonia (j09-j18)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Intraoperative and postprocedural complications and disorders of respiratory system, not elsewhere classified (j95)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J95-J95) Intr~ilcu\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Intraoperative and postprocedural complications and disorders of respiratory system, not elsewhere classified (j95)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Other acute lower respiratory infections (j20-j22)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J20-J22) Othe~ndnk\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Other acute lower respiratory infections (j20-j22)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Other diseases of the respiratory system (j96-j99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J96-J99) Othe~n0m5\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Other diseases of the respiratory system (j96-j99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Other respiratory diseases principally affecting the interstitium (j80-j84)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J80-J84) Othe~afmx\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Other respiratory diseases principally affecting the interstitium (j80-j84)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Other diseases of upper respiratory tract (j30-j39)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J30-J39) Othe~8bwj\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Other diseases of upper respiratory tract (j30-j39)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find diagnoses related to diseases of the respiratory system (j00-j99), specifically acute upper respiratory infections (j00-j6), chronic lower respiratory diseases (j40-j47), influenza and pneumonia (j9-j18), intraoperative and postprocedural complications and disorders of respiratory system, not elsewhere classified (j95), other acute lower respiratory infections (j20-j22), other diseases of the respiratory system (j96-j99), other respiratory diseases principally affecting the interstitium (j80-j84), and other diseases of upper respiratory tract (j30-j39). The accuracy scale is set to 100, and the panel timing is set to ANY. This query will include all diagnoses within these categories, and the panel will be inverted. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>@15:59:22</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery) </item_name>
<item_key>masterid:27730</item_key>
<tooltip>(PrevQuery) Cough-Acute upper respiratory infections of multiple or unspecified sites@15:20:40@15:58:3</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a history of acute upper respiratory infections of multiple or unspecified sites, including cough, within any time frame. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Patient Set for "@15:59:22"@15:59:57</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>Patient Set for "@15:59:22"</item_name>
<item_key>patient_set_coll_id:60404</item_key>
<tooltip>@15:59:22 [5-4-2023] [demo] [PATIENTSET_60404]</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find a patient set that includes all patients with a specific condition, based on the given query_name "Patient Set for "@15:59:2"@15:59:57", with any query_timing and panel_timing, and a specificity_scale of 0, panel_accuracy_scale of 100, and total_item_occurrences of 1, where the item_name is "Patient Set for "@15:59:2" and the item_key is "patient_set_coll_id:60404". The tooltip for this query is "@15:59:22 [5-4-2023] [demo] [PATIENTSET_60404]", and the item_is_synonym is set to false. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Chronic obstruc@11:15:00</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Chronic obstructive diseases</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Respiratory system (460-519)\Chronic obstructive diseases (490-496)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Respiratory system \ Chronic obstructive diseases</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with a diagnosis of chronic obstructive diseases in the respiratory system (codes 490-496) at any time during their medical history, with a specificity scale of 0, accuracy scale of 100, and a panel number of 1. The panel timing and query timing are set to ANY, and the panel is not inverted. This query is focused on the ENC (Encounter) class, and the item is not a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Chronic-Broncho@11:15:47</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Chronic obstructive diseases</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Respiratory system (460-519)\Chronic obstructive diseases (490-496)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Respiratory system \ Chronic obstructive diseases</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Bronchodilators</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME219) respiratory agents\(LME223) bronchodilators\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ respiratory agents \ bronchodilators</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with chronic obstructive diseases and have also been prescribed bronchodilators. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asthma-Bronchi@17:24:18</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Asthma</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J40-J47) Chro~fbox\(J45) Asthma\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Chronic lower respiratory diseases (j40-j47) \ Asthma</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>1</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Bronchiectasis</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J40-J47) Chro~fbox\(J47) Bronchiectasis\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Chronic lower respiratory diseases (j40-j47) \ Bronchiectasis</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Bronchitis, not specified as acute or chronic</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J40-J47) Chro~fbox\(J40) Bronchit~iy95\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Chronic lower respiratory diseases (j40-j47) \ Bronchitis, not specified as acute or chronic</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Emphysema</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J40-J47) Chro~fbox\(J43) Emphysema\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Chronic lower respiratory diseases (j40-j47) \ Emphysema</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Other chronic obstructive pulmonary disease</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J40-J47) Chro~fbox\(J44) Other ch~vw4p\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Chronic lower respiratory diseases (j40-j47) \ Other chronic obstructive pulmonary disease</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Simple and mucopurulent chronic bronchitis</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J40-J47) Chro~fbox\(J41) Simple a~soth\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Chronic lower respiratory diseases (j40-j47) \ Simple and mucopurulent chronic bronchitis</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Unspecified chronic bronchitis</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J40-J47) Chro~fbox\(J42) Unspecif~5k0q\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Chronic lower respiratory diseases (j40-j47) \ Unspecified chronic bronchitis</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Acute upper respiratory infections (j00-j06)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J00-J06) Acut~bb2r\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Acute upper respiratory infections (j00-j06)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Influenza and pneumonia (j09-j18)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J09-J18) Infl~7z2l\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Influenza and pneumonia (j09-j18)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Intraoperative and postprocedural complications and disorders of respiratory system, not elsewhere classified (j95)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J95-J95) Intr~ilcu\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Intraoperative and postprocedural complications and disorders of respiratory system, not elsewhere classified (j95)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Lung diseases due to external agents (j60-j70)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J60-J70) Lung~5ey0\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Lung diseases due to external agents (j60-j70)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Other acute lower respiratory infections (j20-j22)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J20-J22) Othe~ndnk\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Other acute lower respiratory infections (j20-j22)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Other acute lower respiratory infections (j20-j22)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J20-J22) Othe~ndnk\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Other acute lower respiratory infections (j20-j22)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Other diseases of the pleura (j90-j94)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J90-J94) Othe~kwrw\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Other diseases of the pleura (j90-j94)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Other diseases of the respiratory system (j96-j99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J96-J99) Othe~n0m5\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Other diseases of the respiratory system (j96-j99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Other diseases of upper respiratory tract (j30-j39)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J30-J39) Othe~8bwj\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Other diseases of upper respiratory tract (j30-j39)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Other respiratory diseases principally affecting the interstitium (j80-j84)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J80-J84) Othe~afmx\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Other respiratory diseases principally affecting the interstitium (j80-j84)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Suppurative and necrotic conditions of the lower respiratory tract (j85-j86)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J85-J86) Supp~2ijw\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Suppurative and necrotic conditions of the lower respiratory tract (j85-j86)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find diagnoses related to diseases of the respiratory system (j00-j99), including acute upper respiratory infections (j00-j06), influenza (j09-j111), pneumonia (j12-j18), other acute lower respiratory infections (j20-j22), diseases of the pleura (j90-j94), other diseases of the respiratory system (j96-j99), other diseases of upper respiratory tract (j30-j39), other respiratory diseases principally affecting the interstitium (j80-j84), suppurative and necrotic conditions of the lower respiratory tract (j85-j86), and lung diseases due to external agents (j60-j70). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name> Visit at ages @11:11:54</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> Visit at ages 18-34 years old</item_name>
<item_key>\\i2b2_VISIT\i2b2\Visit Details\Age at visit\18-34 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Visit Details \ Age at visit \ 18-34 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all male patients who had a visit between the ages of 18 and 34 years old. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Male@07:23:27</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all male patients in the i2b2 database using the query builder with a specificity scale of 0 and accuracy scale of 100, searching for any occurrence of the demographic gender attribute "Male" in the "Demographics" panel. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name> 5 day-Gender@11:52:02</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 5 days</item_name>
<item_key>\\i2b2_VISIT\i2b2\Visit Details\Length of stay\ 5 days\</item_key>
<item_icon>LA</item_icon>
<tooltip>Visit Details \ Length of stay \ 5 days</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with a length of stay of 5 days or more, and their gender information from the demographics table in the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Deceased@13:51:47</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Deceased</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Vital Status\Deceased\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Vital Status \ Deceased</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have a vital status of deceased within the Demographics section of the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diseases of the@09:19:17</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the respiratory system (j00-j99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find diagnoses related to diseases of the respiratory system (j0-j9) within the ICD10_ICD9 classification, with any timing and a specificity scale of 0, using the panel with number 1 and a total of 1 item occurrence, with a 100% accuracy scale, and an icon of FA, excluding synonyms. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Chemistry@13:34:44</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Chemistry</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the Chemistry lab test, regardless of timing, with a specificity scale of 0 and accuracy scale of 100, in a panel with only one item, where the item's name is "Chemistry", key is "\\i2b2_LABS\i2b2\Labtests\LAB\(LLB6) Chemistry", icon is "FA", and class is "ENC". This query is not inverted and the item is not a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diseases of the@15:53:37</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the circulatory system (i00-i99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(I00-I99) Dise~3w8h\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the circulatory system (i00-i99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all diagnoses related to diseases of the circulatory system, specifically those coded within the range of I00-I9 in the ICD10 or ICD9 classification systems, with a high level of specificity and no time restriction. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diseases of the@17:06:24</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the respiratory system (j00-j99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find diagnoses related to diseases of the respiratory system, specifically those categorized under ICD-10 and ICD-9 codes ranging from J00 to J9, with a specificity scale of 0 and a panel accuracy scale of 100, using the query name "Diseases of the@17:06:24" and a timing of "ANY" for both the query and the panel. The query will search for a single occurrence of the item, and the item is not a synonym. The icon for this query is FA, and the class is ENC. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Patient Instruc@20:34:13</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>6</hlevel>
<item_name>Maxair 0.2 mg/inh aerosol with adapter 3 M Pharmaceuticals</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME219) respiratory agents\(LME223) bronchodilators\(LME224) adrenergic bronchodilators\pirbuterol\00089079021\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ respiratory agents \ bronchodilators \ adrenergic bronchodilators \ pirbuterol \ maxair 0.2 mg/inh aerosol with adapter 3 m pharmaceuticals</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Patient Instructions</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Instructions\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>CONTAINS</value_operator>
<value_constraint>night</value_constraint>
<value_type>LARGETEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find medications containing pirbuterol with a specific instruction that mentions the word "night" in the patient instructions. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Patient Instruc@20:38:05</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>6</hlevel>
<item_name>Maxair 0.2 mg/inh aerosol with adapter 3 M Pharmaceuticals</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME219) respiratory agents\(LME223) bronchodilators\(LME224) adrenergic bronchodilators\pirbuterol\00089079021\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ respiratory agents \ bronchodilators \ adrenergic bronchodilators \ pirbuterol \ maxair 0.2 mg/inh aerosol with adapter 3 m pharmaceuticals</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Patient Instructions</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Instructions\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>CONTAINS[database]</value_operator>
<value_constraint>%breath%</value_constraint>
<value_type>LARGETEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances where the medication "Maxair 0.2 mg/inh aerosol with adapter 3 Pharmaceuticals" was prescribed to patients and the patient instructions contain the word "breath" in their description. The query is set to have a specificity scale of 0, meaning it will return all possible matches, and the accuracy scale is set to 100, indicating that all results are relevant. The timing is set to "ANY," meaning it will search for any time frame. The panel number is 1, and the panel timing is also set to ANY. The total number of occurrences is set to 1. The query will search for the medication under the category of "Medications" and will specifically look for it under the subcategories of "Respiratory Agents," "Bronchodilators," and "Adrenergic Bronchodilators." The tooltip provided is "medications \ respiratory agents \ bronchodilators \ adrenergic bronchodilators \ maxair 0.2 mg/inh aerosol with adapter 3 m |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diseases of the@15:47:30</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the circulatory system (i00-i99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(I00-I99) Dise~3w8h\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the circulatory system (i00-i99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find diagnoses related to diseases of the circulatory system (i0-i9) with a specificity scale of 0, panel timing set to ANY, and panel accuracy scale set to 100, using the ICD10_ICD9 classification. This query is designed to retrieve data from the ENC (Encoded) class, with the icon representing the diagnoses of diseases of the circulatory system (i0-i9) and the tooltip providing additional information about the query. The query will search for any time period (ANY) and has a single panel with a total of one item occurrence. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diseases of the@15:47:38</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the circulatory system (i00-i99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(I00-I99) Dise~3w8h\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the circulatory system (i00-i99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all diagnoses related to diseases of the circulatory system (ICD10-ICD9 codes i0-i9) with a specificity scale of 0 and accuracy scale of 100, with the query named "Diseases of the@15:47:38" and a timing of ANY. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diagnos-Diagnos@16:12:22</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diagnostic Radiology</item_name>
<item_key>\\i2b2_PROC\i2b2\Procedures\PRC\ICD9 (Inpatient)\(87-99) Diagnostic and nonsurgical procedures\(p87) Diagnostic Radiology\</item_key>
<item_icon>FA</item_icon>
<tooltip>Procedures \ ICD9 (Inpatient) \ Diagnostic and nonsurgical procedures \ Diagnostic Radiology</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Diagnostic and nonsurgical procedures</item_name>
<item_key>\\i2b2_PROC\i2b2\Procedures\PRC\ICD9 (Inpatient)\(87-99) Diagnostic and nonsurgical procedures\</item_key>
<item_icon>FA</item_icon>
<tooltip>Procedures \ ICD9 (Inpatient) \ Diagnostic and nonsurgical procedures</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of diagnostic radiology procedures performed as part of the ICD9 (Inpatient) classification, specifically within the Diagnostic and nonsurgical procedures category, with an accuracy scale of 1000% and any timing. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>X-Ray- 35--Diagn@14:41:49</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>X-Ray Reports</item_name>
<item_key>\\i2b2_REP\i2b2\Reports\X-Ray Reports\</item_key>
<item_icon>LAE</item_icon>
<tooltip>i2b2 \ Reports \ X-Ray Reports</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Diagnostic and nonsurgical procedures</item_name>
<item_key>\\i2b2_PROC\i2b2\Procedures\PRC\ICD9 (Inpatient)\(87-99) Diagnostic and nonsurgical procedures\</item_key>
<item_icon>FA</item_icon>
<tooltip>Procedures \ ICD9 (Inpatient) \ Diagnostic and nonsurgical procedures</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find X-Ray Reports for patients aged 35-44 years old with Diagnostic and nonsurgical procedures. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diseases of the@09:18:35</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the respiratory system (j00-j99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all diagnoses related to diseases of the respiratory system, as classified under the ICD-10 and ICD-9 codes J00-J9, with a specificity scale of 0, a panel timing of ANY, and a total item occurrence of 1. The query is named "Diseases of the@09:18:35" and has an accuracy scale of 100. The panel number is 1, and the query is not inverted. The class of the item is ENC, and it is not a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diseases of the@17:02:06</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the circulatory system (i00-i99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(I00-I99) Dise~3w8h\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the circulatory system (i00-i99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all diagnoses related to diseases of the circulatory system, as classified under ICD-10 and ICD-9 codes ranging from I00 to I99, with a specificity scale of 0 and a panel accuracy scale of 100, with the query named "Diseases of the@17:02:06" and a timing of ANY, where the query timing and panel timing are both set to ANY, and the panel is not inverted. The item's hierarchy level is 1, and the item key is "ICD10_ICD9\Diagnoses\(I0-I9) Diseases of the circulatory system (i0-i9)". The icon for the item is FA, and the tooltip for the item is "Diagnoses \ Diseases of the circulatory system (i0-i9)". The class of the item is ENC, and it is not a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>College grad.@16:08:43</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>College grad.</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Education\College grad.\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Demographics \ Education \ College grad.</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients who have mentioned 'College grad' in their demographic information, specifically in the 'Education' category, using the i2b2 query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Admit D-Admit D@16:45:42</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Endocrine disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Endocrine disorders (240-259)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Injury and poisoning</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Injury and poisoning (800-999)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Injury and poisoning</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Injury and poisoning (800-999)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with an Admit Diagnosis of Endocrine disorders (ICD codes 240-259) or Injury and poisoning (ICD codes 80-999) with a specificity scale of 0, panel timing set to ANY, and a panel accuracy scale of 100. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Ischemic heart @09:19:00</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Ischemic heart disease</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Ischemic heart disease (410-414)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Ischemic heart disease</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of ischemic heart disease at any time in their medical history, with a high level of specificity (1000% accuracy) and no synonyms included. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diseases of the@15:56:15</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the respiratory system (j00-j99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all diagnoses related to diseases of the respiratory system (j0-j9) using the ICD10_ICD9 classification with a specificity scale of 0, panel timing set to ANY, and panel accuracy scale set to 100. The query will be named "Diseases of the@15:56:15" and the icon used will be FA. This query will be part of a panel with panel number 1 and total item occurrences set to 1. The class of this item will be ENC, and it will not be considered a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Patient Instruc@20:47:48</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>6</hlevel>
<item_name>Maxair Autohaler 0.2 mg/inh aerosol with adapter 3 M Pharmaceuticals</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME219) respiratory agents\(LME223) bronchodilators\(LME224) adrenergic bronchodilators\pirbuterol\00089081710\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ respiratory agents \ bronchodilators \ adrenergic bronchodilators \ pirbuterol \ maxair autohaler 0.2 mg/inh aerosol with adapter 3 m pharmaceuticals</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Patient Instructions</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Instructions\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>CONTAINS</value_operator>
<value_constraint>a</value_constraint>
<value_type>LARGETEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of medications named "Maxair Autohaler 0.2 mg/inh aerosol with adapter 3 M Pharmaceuticals" in the i2b2 database where the patient instruction field contains the letter "a". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Patient Instruc@20:48:31</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>6</hlevel>
<item_name>Maxair Autohaler 0.2 mg/inh aerosol with adapter 3 M Pharmaceuticals</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME219) respiratory agents\(LME223) bronchodilators\(LME224) adrenergic bronchodilators\pirbuterol\00089081710\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ respiratory agents \ bronchodilators \ adrenergic bronchodilators \ pirbuterol \ maxair autohaler 0.2 mg/inh aerosol with adapter 3 m pharmaceuticals</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Patient Instructions</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Instructions\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>CONTAINS[database]</value_operator>
<value_constraint>mg</value_constraint>
<value_type>LARGETEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the medication "Maxair Autohaler 0.2 mg/inh aerosol with adapter 3 M Pharmaceuticals" where the patient instruction contains the term "mg" in the medication field within the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Ischemi-Male@09:19:18</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Ischemic heart disease</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Ischemic heart disease (410-414)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Ischemic heart disease</tooltip>
<class>ENC</class>
<constrain_by_date>
<date_from>1979-12-01T00:00:00.000-05:00</date_from>
</constrain_by_date>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all male patients with a diagnosis of ischemic heart disease in the i2b2 database, with no specific time constraint for the diagnosis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Patient Instruc@20:32:38</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>6</hlevel>
<item_name>Maxair 0.2 mg/inh aerosol with adapter 3 M Pharmaceuticals</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME219) respiratory agents\(LME223) bronchodilators\(LME224) adrenergic bronchodilators\pirbuterol\00089079021\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ respiratory agents \ bronchodilators \ adrenergic bronchodilators \ pirbuterol \ maxair 0.2 mg/inh aerosol with adapter 3 m pharmaceuticals</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Patient Instructions</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Instructions\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
<constrain_by_value>
<value_operator>CONTAINS[database]</value_operator>
<value_constraint>breath</value_constraint>
<value_type>LARGETEXT</value_type>
</constrain_by_value>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances where the medication "Maxair 0.2 mg/inh aerosol with adapter 3 Pharmaceuticals" was prescribed to patients, and the patient instructions for this medication contain the word "breath" in the database. The query will be applied to the "Medications" panel, and the specificity scale is set to 0, meaning that all occurrences of the medication will be considered regardless of the specificity of the information provided. The accuracy scale is set to 100, indicating that the query should return highly accurate results. The query timing is set to "ANY," meaning it will search for instances regardless of when the medication was prescribed. The panel timing is also set to "ANY," meaning it will consider all panels regardless of when they were created. The invert value is set to 0, meaning the query will return positive results only. There is only one item in the panel, and the hierarchy level is set to 6. The class is set to "ENC," which stands for "Encounter." The tooltip provides additional information about the medication and its classification. |