sagawa commited on
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93a77af
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Create app.py

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  1. app.py +55 -0
app.py ADDED
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+ import gradio as gr
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+
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+ # Assuming 'predict_stability' is your function that predicts protein stability
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+ def predict_stability(pdb_file=None, sequence=None):
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+ # Dummy return for illustration; replace with your actual prediction logic
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+ return "Predicted Stability: Example Output"
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+
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+ # Gradio Interface
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+ with gr.Blocks() as demo:
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+ gr.Markdown(
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+ """
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+ # Protein Stability Prediction
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+ **Predict the stability of a protein from its sequence or PDB file.**
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+ """
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+ )
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+
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+ with gr.Tabs():
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+ with gr.TabItem("Upload PDB File"):
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+ gr.Markdown("### Upload your PDB file:")
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+ pdb_file = gr.File(label="Upload PDB File")
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+ predict_button = gr.Button("Predict Stability")
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+ prediction_output = gr.Textbox(label="Stability Prediction", interactive=False)
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+
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+ predict_button.click(fn=predict_stability, inputs=pdb_file, outputs=prediction_output)
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+
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+ with gr.TabItem("Enter Protein Sequence"):
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+ gr.Markdown("### Enter the protein sequence:")
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+ sequence = gr.Textbox(
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+ label="Protein Sequence",
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+ placeholder="Enter your protein sequence here...",
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+ lines=8,
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+ )
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+ predict_button = gr.Button("Predict Stability")
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+ prediction_output = gr.Textbox(label="Stability Prediction", interactive=False)
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+
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+ predict_button.click(fn=predict_stability, inputs=sequence, outputs=prediction_output)
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+
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+ with gr.Row():
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+ gr.Markdown(
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+ """
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+ ### How to Use:
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+ - **Upload PDB File**: Choose the 'Upload PDB File' tab and upload your file.
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+ - **Enter Sequence**: Alternatively, switch to the 'Enter Protein Sequence' tab and input your sequence.
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+ - **Predict**: Click 'Predict Stability' to receive the prediction.
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+ """
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+ )
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+
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+ gr.Markdown(
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+ """
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+ ### About the Tool
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+ This tool allows researchers and scientists to predict the stability of proteins using advanced algorithms. It supports both PDB file uploads and direct sequence input.
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+ """
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+ )
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+
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+ demo.launch()