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N-Step-Checkpoint_0_0.ckpt

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N-Step-Checkpoint_0_5000.ckpt

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N-Step-Checkpoint_1_10000.ckpt

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N-Step-Checkpoint_1_15000.ckpt

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N-Step-Checkpoint_2_20000.ckpt

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N-Step-Checkpoint_3_25000.ckpt

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N-Step-Checkpoint_3_30000.ckpt

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events.out.tfevents.1643396916.cccxc543.3427421.0

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hparams.yaml

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+accelerator: ddp
+batch_size: 64
+beam_size: 0
+checkpoint_every: 5000
+clip_grad: 50
+config_load: null
+config_save: null
+d_dropout: 0.2
+data_path: ''
+data_root: /dccstor/medscan7/smallmolecule/runs/ba-predictor/small-data/affinity
+dataset_length: null
+dataset_name: sol
+debug: true
+device: cuda
+dropout: 0.1
+eval_every: 1000
+fast_dev_run: false
+fc_h: 512
+finetune_path: ''
+freeze_model: false
+from_scratch: false
+gen_save: null
+gpus: 8
+grad_acc: 1
+log_file: null
+lr: 0.001
+lr_end: 0.00030000000000000003
+lr_multiplier: 8
+lr_start: 3.0e-05
+max_epochs: 4
+max_len: 202
+measure_name: measure
+min_len: 1
+mode: cls
+model_arch: BERT_16GPU_Both_10percent_rotate_no_masking
+model_load: null
+model_save: model.pt
+model_save_dir: ./models_dump/
+n_batch: 1800
+n_embd: 768
+n_head: 12
+n_jobs: 1
+n_last: 1000
+n_layer: 12
+n_samples: null
+n_workers: 8
+nucleus_thresh: 0.9
+num_epoch: 1
+num_feats: 32
+num_nodes: 1
+num_seq_returned: 0
+num_workers: 0
+pretext_size: 0
+q_dropout: 0.5
+restart_path: ''
+resume: false
+root_dir: .
+rotate: true
+seed: 12345
+smiles_embedding: /dccstor/medscan7/smallmolecule/runs/ba-predictor/small-data/embeddings/protein/ba_embeddings_tanh_512_2986138_2.pt
+tb_loc: null
+train_load: both
+unlike_alpha: 1.0
+unlikelihood: false
+use_linear: 0
+val_load: null
+vocab_load: null
+vocab_save: null