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+ ---
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+ language:
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+ - protein sequences
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+ datasets:
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+ - Swissprot
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+ tags:
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+ - Protein
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+ - Enzyme Commission
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+ ---
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+
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+ # Dataset
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+
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+ Swissprot is a high quality manually annotated protein database. The dataset contains annotations with the functional properties of the proteins. Here we extract proteins with Enzyme Commission labels.
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+ The dataset is ported from Protinfer: https://github.com/google-research/proteinfer.
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+
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+ The leaf level EC-labels are extracted and indexed, the mapping is provided in `idx_mapping.json`. Proteins without leaf-level-EC tags are removed.
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+
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+
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+ ## Example
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+ The protein Q87BZ2 have the following EC tags.
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+
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+ EC:2.-.-.- (Transferases)
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+ EC:2.7.-.- (Transferring phosphorus-containing groups)
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+ EC:2.7.1.- (Phosphotransferases with an alcohol group as acceptor)
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+ EC:2.7.1.30 (Glycerol kinase)
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+
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+ We only extract the leaf level labels, here EC:2.7.1.30, corresponding to glycerol kinase.
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+