ctheodoris
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Update manuscript link to SharedIt
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README.md
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We assembled a large-scale pretraining corpus, Genecorpus-30M, comprised of ~30 million human single cell transcriptomes from a broad range of tissues from publicly available data. This corpus was used for pretraining [Geneformer](https://huggingface.co/ctheodoris/Geneformer), a pretrained transformer model that enables context-aware predictions in settings with limited data in network biology.
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See [our manuscript](rdcu.be/ddrx0) for details.
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### Supported Tasks
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This corpus was used for pretraining [Geneformer](rdcu.be/ddrx0) and is compatible with pretraining or fine-tuning Geneformer or similar models.
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### Species
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We assembled a large-scale pretraining corpus, Genecorpus-30M, comprised of ~30 million human single cell transcriptomes from a broad range of tissues from publicly available data. This corpus was used for pretraining [Geneformer](https://huggingface.co/ctheodoris/Geneformer), a pretrained transformer model that enables context-aware predictions in settings with limited data in network biology.
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See [our manuscript](https://rdcu.be/ddrx0) for details.
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### Supported Tasks
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This corpus was used for pretraining [Geneformer](https://rdcu.be/ddrx0) and is compatible with pretraining or fine-tuning Geneformer or similar models.
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### Species
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