Geneformer / examples /tokenizing_scRNAseq_data.ipynb

Commit History

add input size tip to instructions
2732369
verified

ctheodoris commited on

update instructions to include reminder about token dictionary
cb1b0d5
verified

ctheodoris commited on

Add instructions to convert gene annotations w/ Ensembl Biomart
77eb432

Christina Theodoris commited on

Add further explanation regarding input file format for transcriptome tokenizer
c34ead6

Christina Theodoris commited on

Update instructions in tokenizing example to clarify requirement for Ensembl ID
d468697

Christina Theodoris commited on

Update instructions in tokenizing example to clarify requirement for Ensembl ID
e606e1c

Christina Theodoris commited on

Add further explanation to tokenizer example script and updated tokenizer to match loompy raised error
78dd83b

Christina Theodoris commited on

Add example for tokenizing .loom dataset
f89f796

Christina Theodoris commited on